Archive for COPIED TO NEW WIKI

Organizations currently registered on AgriFeeds.

Organizations registered at AgriFeeds (as of 11/01/2008) are:

  • Center for International Forestry Research (CIFOR)
  • Centre de coopération internationale en recherche agronomique pour le développement (CIRAD)
  • Department for International Development (DFID)
  • Food and Agriculture Organization of the United Nations (FAO)
  • Forum for Agricultural Research in Africa (FARA)
  • Global Forum on Agricultural Research (GFAR)
  • Institut National de la Recherche Agronomique (INRA)
  • Interamerican Institute for Cooperation in Agriculture (IICA)
  • International Association of Agricultural Information Specialists (IAALD)
  • International Water Management Institute (IWMI)
  • National Agricultural Library (NAL)
  • Wageningen UR
  • World Food Program of the United Nations (WFP)

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AgriFeeds: Web feeds please…

We have recently published “AgriFeeds” as a service to study and provide aggregation of news and events feeds in the domain of Agriculture, Fisheries, Forestry and related subject areas. Although a feasibility study, the idea it to provide a one-stop access point to agricultural news and events, possibility to filter them based on certain filter criteria such as:

The site is part of a “feasibility” study to see the nature of news/events feeds and promotes the Ag-Event Application Profile for sharing event information. All comments and suggestions on its improvement are appreciated!

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AOS workshop agenda

The agenda of the 8th AOS workshop is available from the AIMS website. The agenda boasts a great line-up of presentations on Ontology and Metadata Tools, Methodologies and Tools for Ontology creation and Community Building.

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AGROVOC E-Conference: understanding the users

The purpose of the E-conference is to gather requirements for further AGROVOC enhancement directly from the AGROVOC user community, in order to analyze and incorporate those needs in the medium to long term plan and strategy, for the most used Agricultural thesaurus since 1980. AGROVOC is one of the resources that FAO are using in the NeOn Over-fishing Alerts Case Study.

Agrovoc logo

The E-Conference has been a great success. A total of 43 countries are represented in the Conference. From the list of those who registered, over 55% are from Asia and the Pacific, Africa and Central and South America.

Read a recent article about the Conference on the NeOn Website.

Full report will be made available to everyone via the AIMS website.

Gauri Salokhe, FAO.

 

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Towards an architecture for open archive networks in Agricultural Sciences and Technology

The AGRIS Network is an international initiative based on a collaborative network of institutions, whose aim is to build a common and freely accessible information system for science and technology in agriculture and related subjects. The paper illustrates how the Open Access (OA) and the Open Archive Initiative (OAI) models can be used within the AGRIS Network as a means of solving the problems of information dissemination and exchange of agricultural research outputs. The AGRIS OA model promotes the availability of online content, such as that of grey literature which is not available through commercial distribution channels but significantly contributes to agricultural research and development. The lack of adequate information exchange possibilities between researchers in agricultural sciences and technology represents a significant weakness limiting the ability of researches to properly help address the issues of agricultural development. The OA model also promotes disseminating international, national and regional research output in a way that is highly visible thus removing the restrictions placed by the traditional scientific diffusion arising from print media. This paper presents the possibility to address the accessibility, availability and interoperability issues of exchanging agricultural research output. The paper also presents the needs for standards such as AGRIS Application Profile (AGRIS AP), an exchange standard and controlled vocabularies or subject-specific Knowledge Organization Systems (KOS) as means of assuring quality of the shared information.

Read the full paper:

  • [English]
  • [Chinese] <- Thank you to Zhong Wang for the translation!
  • [French] <- Thank you to Koda for the translation!
  • [Spanish] < Thank you to Franz Martin for the translation!

Your comments, feedback and suggestions are most appreciated.

Gauri Salokhe, FAO.

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Kenya Agris pilot project: Kenya Agricultural Information Network (KAINet)

The Kenya Pilot AGRIS Project aims to establish systems that promote information exchange and access among researchers and other agricultural stakeholders through building capacity to manage information and through establishing institutional repositories of agricultural information. Its bigger vision is to establish a national forum for exchange of agricultural content through a national information network with essentials components such as national electronically repository. The documented lessons learnt will be used to replicate other similar projects within the AGRIS network.  The project is born out of a need to address issues critical to content development and information exchange between users, identified in several AGRIS activities in Kenya as well as the new AGRIS vision which emphasises the following: decentralized capacities to manage and exchange agricultural information;  strengthen national and institutional capacities to manage, disseminate and exchange agricultural Information; availability of full text content and;  promote use of standard tools and methodologies. 

The project if funded by DFID (Department for International Development), through FAO, who are in collaboration with CABI Africa and the Regional Agricultural Information Network (RAIN). It will be initially implemented in 5 pilot institutions and will open to other institutions once the project objectives are realised. The five pilot institutions represent different agricultural institutions including national research systems and universities. The project will be implements over a period of three years (June 2006-June 2009) in three phases  The pilot institutions are: the Kenya Agricultural Research Institute (KARI-HQ) which is leading the project, the Kenya National Agricultural Research Laboratories (KARI-NARL), the Kenya Forestry Research Institute (KEFRI), the Ministry of Agriculture (MoA) and Jomo Kenya University of Agriculture and Forestry (JKUAT). The first phase running from June 2006 to December 2006 was a preparatory phase devoted to build a common vision amongst the Stakeholders and institutionalize the network. The achievements include:

 

  • commitment by the pilot centers & resources secured
  • needs assessment study done and report compiled
  • national planning workshop held
  • draft KAINet framework developed
  • phase II activities, draft work plan and budget developed

The second phase starting 31st December 2006 to 31st of May 2007, will focus on the activities identified in a needs assessment done in phase two. The activities are; support to institutions to develop their ICT/M strategies and policies; establishment of the Kenya Agricultural Information Network (KAINet), its strategy and action plan; Capacity building and technical support on the establishment of institutional information systems; establishment of a framework for sharing information documenting and developing a case study on the lessons learnt from the project. The highlights of the second phase include:

  • a three month’s mission of a FAO information officer to
    Kenya to provide technical support to the activity on capacity building. Between the months of February to mid March 2007, all the pilot centre personnel have been on-site trained on the AGRIS tools and methodologies.
  • All the five institutions have installed WebAGRIS and are now using it for the development of their institutional repositories.
  • A project Management Team comprising of members from each of the institutions has been appointed to collective manage the project.
  • A one day stakeholder workshop was held on the 28th/2/2007 to review the progress of each centre and to recommit on the activities of the second phase. Most of these activities are underway.
  • A four day write-shop is scheduled for the week of 19th-23rd /3/2007 for the development of draft institutional strategies and policies under the leadership of a policy consultant.
  • A training programme has been developed covering the identified areas for skills development and is under circulations for comments from the institutions.
  • A KAINet Dgroup e-forum has been established and is being used for discussions and exchange of experiences and documents.
  • Identification and preliminary work on the Kenya Agricultural Research Database (KARD) with 40, 000+ records as the basis of the national central repository. KARD has bibliographic records from many agricultural research institutions in
    Kenya.

The second phase will conclude with a two day stakeholder workshop in May to report on the status and progress of each centre according to the five activities outlined above and to plan for phase 3.  

Irene Onyancha, FAO.

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Background: the process

The Agriscontent taskforce is part of a process that has been going on for some years. For a listing of most important meeting see http://www.fao.org/aims/pub_workshops.jsp

You can see there that this process is closely related to the Agricultural Ontology Service initiative, that has been meeting annually since 2001.

There has been a series of meetings that has been adressing a wider set of issues related to agricultural information services.

A first meeting was held in Brussels in november 2000. This meeting was organized as it became clear that the agricultural community could only benefit from the XML technology that had just been introduced if it would agree on common standards for information exchange. The “Dublin Core” standard for electronic resources was discussed in some detail.

A second meeting was held in London, june 2003. The background of this meeting was the realization that standards alone would not change the world. They should be used to create collaborative services for which there should be a need and a demand. Therefore the policy side of things was discussed on top of a wider list of technical issues.

To carry this process further in May 2005 a small expert meeting was held in Lexington to prepare for a later meeting in Rome, October 2005. At this meeting it became clear that to carry this process further there should be an organization that takes reponsibility. At the same time there was a general feeling that it would not be desirable to create a new structure, but that it would be preferable to make better use of existing organizations. To this goal taskforces were formed with representatives from different organizations in three different areas: “advocacy”, “content” and “capacity building”. The work on capacity building has been developed in close co-ordination with the IMARK organisation. The content taskforce (that we call now Agriscontent) should set the targets for the advocacy group to decide on priorities that need to be advocated.

Part of the Agriscontent group held a face-to-face meeting in May 2006 in Nairobi from which the terms of reference for this group emerged. This face-to-face meeting should come up with proposals and priorities for a wider expert consultation to be held in Rome later this year. (It was been scheduled for October 23/24)

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How CIRAD stands vis-à-vis the Open Archives projects

 

At the local level

CIRAD’s database, AGRITROP

AGRITROP is CIRAD’s bibliographic and full text database.

 

AGRITROP is composed of references associated with full text (when it exists) of all CIRAD’s publications (books, book chapters, conference proceedings, conference communications, journal articles, training courses, pictures) and of the books available in CIRAD’s libraries.

 

AGRITROP uses the AGRIS/CARIS categorization scheme and the French AGROVOC thesaurus to index its data.

 

AGRITROP is based on the library information system LORIS/DORIS which is a commercial software developed by a private French company EVER. LORIS/DORIS is not OAI compliant.

UNIMARC is the format of AGRITROP.

 

Outputs from AGRITROP

CIRAD hasn’t supplied AGRIS with AGRITROP data for several years.

Because AGRITROP isn’t OAI compliant, CIRAD has to extract publications lists from AGRITROP and then display them on the Internet (http://publications.cirad.fr/) so that references and full text can be indexed and retrieved by search engines like Google and Google Search.

 

Data from AGRITROP could be exported in a XML format but the output and process are complex and can’t easily be used to export data according to DC or AGRIS AP.

 

 

At the national level

CIRAD’s participation in the national Open Archive

CIRAD has been participating since 2006 in the national Open Archive HAL (Hyper Article on Line) which is hosted and managed by CNRS (the National Scientific Research Center).

HAL was initially designed to host scientific publications which are accepted by peer-review journals.

HAL covers a wide range of scientific areas from mathematics and physics (HAL is linked to Arxiv) to medicine (HAL will soon be linked to PubMed), psychology and agronomy.

HAL is harvested by Google and Google Scholar.

 

Our main concern with HAL is that it is not intended to host unconventional literature (technical documents, activity and expert reports, unpublished communications). Its classification scheme isn’t a conventional one and its keywords aren’t controlled.

 

Conclusion

CIRAD’s database isn’t OAI compliant and is not directly available through OAI harvesters and search engines like Google and Google Scholar.

Although CIRAD participates in the national Open Archive HAL, it can’t use HAL to promote CIRAD unconventional publications which form the greater part of CIRAD’s literature.

 

Furthermore, the agronomic field is a minor subject in HAL which isn’t based on a well established classification scheme (like the AGRIS/CARIS) nor as a controlled vocabulary (like AGROVOC).

 

 

CIRAD’s requirements in order to participate at the international level

The best option for CIRAD, in terms of access to its publications, would be to set up an institutional repository based on OAI standard and controlled vocabularies (ISI subjects for scientific classification, AGRIS/CARIS for applied research fields and AGROVOC for keywords).

This repository would accept any type of publication (from peer review articles to technical documents) in order to give access on the Internet to unconventional literature produced by CIRAD’s researchers.

 

What CIRAD thinks of AGRIS AP

It is essential for our repository to use a standard and as complete as possible a metadata set. Moreover, it is essential that CIRAD’s publications can be harvested, searched, retrieved and read on the Internet according to standard data. However, AGRIS AP is a little too heavy and complicated for exporting data easily in a XML format.

What we need is a simplified metadata set from AGRIS AP which would be processed by service providers, like the one FAO proposes to set up for the AGRIS network and the international agronomic research community.

 

MC Deboin 19/01/2007

 

 

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Subbiah Arunachalams Post to the BOIA on the AGRIS OAI Workshop

Close on the heals of the successful two-day international workshop on
electronic publishing and open access: developing country perspectives, held
at the Indian Institute of Science, Bangalore, there was another workshop on
open access in India. This workshop, essentially meant to address the needs
of agricultural researchers in India, was hosted jointly by ICRISAT, a CGIAR
institution, and the UN Food and Agricultural Organization.

participants in the AGRIS OAI workshop

About twenty participants – including the vice chancellor of an agricultural
university, editors of agricultural journals, scientists and librarians of
agricultural universities and the laboratories of the Indian Council of
Agricultural Research attended the workshop. Dr P M Bhargava, vice chairman
of India’s National Knowledge Commission gave an inspiring opening address.
Societies where knowledge flowed freely were far more prosperous than
societies where knowledge was withheld, he said. He expressed his full
support to open source software, open standards and open access to scientific
and scholarly literature and told the gathering that the National Knowledge
Commission had recommended open access to scientific and scholarly research
publications, especially those resulting from publicly funded research
projects, to the Prime Minister. As a scientist and a biologist, however, he
said he would like to publish his paper in Nature, Science or Cell and that
indeed it would hinder the progress of science if he were to publish a paper
that would be accepted by Nature in a lesser journal. The challenge for us,
he said, was to find ways by which these journals could be made open access.

The workshop was inaugurated by Dr J D H Keatinge, Deputy Director General of
ICRISAT, whom I and Alma Swan had met in the first week of Januaray 2006 and
had a brief discussion on the advantages of open access. But for his support
this workshop might not have taken place. When Dr Bhargava said that people
would always like to read print-on-paper versions, Dr Keatinge disagreed
saying that his teenage children do virtually everything – reading, listening
to music and so on – on computers!

The workshop was largely conceived by Jai Haravu, a former librarian at
ICRISAT and now an information management consultant, and Johannes Keizer of FAO, Rome. Johannes spoke about the initiatives of the AGRIS network and how AGRIS network can help India develop an open access agricultural information network. Dr D K Sahu of MedKnow spoke on how we could convert Indian agricultural journals into open access ‘feeless-free’ journals. He provided evidence from MedKnow journals to show that going open access indeed helped in increasing the number of subscribers to the print version apart from attracting more papers, especially from outside India, and citations and
visibility.

Subbiah Arunachalam provoked the participants by asking them if Indian Institute of Science, National Institute of Technology and several CSIR laboratories could set up interoperable institutional archives what prevented ICAR laboratories from setting up their own archives. He drew attention to the more than 730 institutional archives around the world and the more than 2,600 OA journals and urged Indian agricultural researchers, librarians and
policymakers to adopt open access.

Dr A R D Prasad of the Indian Statistical Institute, Bangalore, spoke about
the need for OA repositories, DSpace software, need for training and capacity
building. He told about the number of workshops conducted both at ISI,
Bangalore, and elsewhere in India. His colleague Dr Devika Maddali explained
in some detail how to plan and set up and sustain an institutional archive.

Dr Mitali Ghosh Roy of ICAR gave an overview of the publication activity at
ICAR. The day ended with a lively audio conversation with three distinguished
OA advocates, viz. Peter Suber, Leslie Chan and Peter Ballantyne. Questions
from the participants included concern about depositing papers when the
copyright resided with the journal publisher, subject-based central
repository vs institutional repository, loss of subscription revenue at a
time when the Ministry supporting the journal is keen to increase income from
subscriptions, etc. The participants found this session, although late in the
day, very interesting and useful.

A working group spent an hour in the evening to draw up an action plan.

Day two started with a session on Indian initiatives.
Sukhdev Singh of the national Informatics Centre, New Delhi, briefed us about
IndMED, MedIND and OpenMED. He made a simple but profound statement: The end
users (those who visit the archive for information) know far more than those
who create the archives, and those who create and maintain the archive should
give them what the users want and not what the archive owners want to give.
Srinivas of ICRISAT described the services provided by the ICRISAT library
and how their internal needs led them to go digital and subsequently open
access. The ICRISAT institutional archive will be officially up in the first
week of January 2007.
Francis Jayakanth of the Indian Institute of Science described the value
additions made to India’s first institutional archive, which currently has
over 5,700 papers.

Ms Gauri Salokhe of FAO spoke about AGRIS standards, and in particular the modifications AGRIS has made in Dublin Core.

Dr P Rama Rao of the National Academy of Agricultural Research management,
Hyderabad, led a panel discussion which looked at how the participants could
influence policy and what they should do next.

It looks to me that at last the agriculture sector in India will make a
beginning and within the next six months a few institutions may set up their
own interoperable OA archives and upload annual reports, newsletters, theses
and conference papers. But archives with refereed research papers and OA
journals may take a little longer.

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Position Statements on open access

Several organizations have published a statement on their policy with regard to open access publishing. Quite recently the British research councils published their statement on http://www.rcuk.ac.uk/access/.

There is a discussion going on in the Deutsche Forschungsgemenschaft, see http://openaccess.eprints.org/index.php?/archives/70-Optimizing-Open-Access-Guidelines-of-Deutsche-Forschungsgemeinschaft.html

The Wellcome trust has published their statement at
http://www.wellcome.ac.uk/doc_WTD002766.html

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